Little Projects


FFParam

A package for force-field parametrisation that I have written together with Anmol Kumar during my PostDoc.


SOFTWARE TOOLBOX

First website created with sphinx as part of a PhD course called Software Toolbox.


MD REHBERI

A mini guide for MD simulations in Turkish. I have experimented with turning a Jupyter notebook into a website.


WEB SCRAPING & NLP & DATA ANALYSIS

A little project where I parse websites to collect data, utilize KoNLPy (Korean Natural Language Processing Python package) and try to answer a question based on the data.


PDBPARSER

Yet another package to parse PDB files. It was created specifically to process UniProt families for eBDIMs software. I have started refactoring it but still not in a really good shape yet.