Category: Little Projects

  • The Joy

    The Joy

    I have often wondered why human kind in different parts of the world, independently, believed in a creator. Creator took different forms, nevertheless, the idea of a higher being/force was there since the beginning of our history (figuratively speaking, my anthropology knowledge is better than Flintstones, but not great). I think I have the answer Read more

  • Oppa Bias

    Oppa Bias

    I watch quite a lot of Korean dramas. It is my one and only addiction. My addiction is on a level of “Let me learn Korean because translation to English just does not work. The culture is not right!”. I made some progress reading Hangul, completed a Coursera course, and have not spoken a word Read more

  • I present you Protein Art…

    I present you Protein Art…

    It is funny how I have searched for the name protein art for this website with a concept in mind and never actually work on it. Inspiration struck before, had lots of ideas and I have managed to create a masterpiece for my thesis cover but no action after that… I finally picked up this Read more

  • A tutorial for MD simulations in Turkish

    A tutorial for MD simulations in Turkish

    http://mdrehberi.proteinart.net/ It was fun, and frustrating at the same time to work with a jupyter notebook. Running it on your computer is so much fun. Thanks to NGLViewer  I was able to show the structures in a more interactive way. Writing everything in Jupyter notebook and uploading it to Github is a nice combination. The source Read more

  • Scripts Toolbox for Protein Art

    Scripts Toolbox for Protein Art

    Look at me, all grown up using git and creating websites with sphinx. Why I started all this? Well to finish a course project. And also I had to obtain better programming practices. If you want to read a fancier, longer answer including why I needed better programming practices here is your answer: Coding is Read more

  • Lots of ‘Oh no! I didn’t finish the project!’s and ‘Why?’s …

    Lots of ‘Oh no! I didn’t finish the project!’s and ‘Why?’s …

    Starting to feel like my brain is the crazy one here and there is actually nothing wrong with my body. Now I’m suffering from knee pain… I have been standing a bit more than usual, but so what! You don’t have to punish me for several days for that. I got the message already. I Read more